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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16558340_16559016_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16558340 - 16559016

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTGTTCTTACGC

Flanking Amino Acid:

TLSNEELEVKADNCEYGKEW

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

79.5

0.66

0.8

77.2

31.5

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

56.2

0.17

1.9

69.13

Associated Gene:

Gene:

STAP1

Ensembl Gene ID:

ENSAPLG00000008926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009288

16554064 - 16562062

7999