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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16569454_16570373_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16569454 - 16570373

Intron Length:

920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCATACCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTTGCATACCT

Flanking Amino Acid:

VEEAKSSPVHILNFDDQSTP

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

80.1

34.8

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

0.38

0.9

59.6

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

54.6

0.22

2.3

84.77

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008578

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032219

16562304 - 16574049

11746

ENSAPLT00000025089

16566184 - 16574049

7866