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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16570578_16571607_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16570578 - 16571607

Intron Length:

1030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTTT

5'SS Class:

major

3'SS Sequence:

CTCCTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

ATGTCAGTACTC

Flanking Amino Acid:

AAVTTGTVGKRYTASISPPS

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

81.7

32.3

Major BPS

0.45

57.8

Major PPT

81.5

0.71

0.7

80.5

24.8

Minor 5ss

48.6

-0.1

2.4

67.6

43.4

Minor BPS

43.2

-0.5

2.3

57.38

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008578

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032219

16562304 - 16574049

11746

ENSAPLT00000025089

16566184 - 16574049

7866