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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16573447_16573830_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16573447 - 16573830

Intron Length:

384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGCTTT

5'SS Class:

weak_major

3'SS Sequence:

GTTTCTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

GTAAACATAATT

Flanking Amino Acid:

KRKHNAQHRLQDSSAAMKVM

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

72.9

39.3

Major BPS

0.82

0.8

24.9

Major PPT

84.4

0.77

0.8

77.4

36.9

Minor 5ss

0.24

2.7

79.2

35.5

Minor BPS

49.5

0.04

1.8

69.08

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008578

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032219

16562304 - 16574049

11746

ENSAPLT00000025089

16566184 - 16574049

7866

ENSAPLT00000008956

16571894 - 16595252

23359