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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16579778_16580543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16579778 - 16580543

Intron Length:

766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTGTT

5'SS Class:

major

3'SS Sequence:

ACTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

CTTTGTTCAACT

Flanking Amino Acid:

ERVNYAMRPSGGLMITGIVC

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

78.3

36.2

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

83.3

0.75

0.9

80.8

36.2

Minor 5ss

37.6

-1.4

3.6

58.4

46.1

Minor BPS

58.4

0.34

79.65

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008578

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008956

16571894 - 16595252

23359