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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17007819_17038517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17007819 - 17038517

Intron Length:

30699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACCAT

U12 Branch Point Sequence:

TTCTCCTTGTCT

Flanking Amino Acid:

VSVNVTTNQAAPSPVSSVKK

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

57.8

0.19

1.3

67.1

39.2

Major PPT

82.5

0.73

0.8

76.3

32.3

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

52.3

0.15

3.5

87.07

39.1

Associated Gene:

Gene:

EPHA5

Ensembl Gene ID:

ENSAPLG00000007060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019989

16917263 - 17091277

174015

ENSAPLT00000007467

16902988 - 17091277

188290

ENSAPLT00000042216

16902988 - 17092218

189231

ENSAPLT00000038272

16917263 - 17092218

174956