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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17064041_17065177_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17064041 - 17065177

Intron Length:

1137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGGAAA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TTTTTCCTGAAG

Flanking Amino Acid:

CITIERVIGAGEFGEVCSGR

Intron Amino Acid Position:

595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

69.3

36.5

Major BPS

0.72

38.9

Major PPT

81.8

0.72

0.9

24.6

Minor 5ss

37.8

-1.4

3.1

44.4

45.6

Minor BPS

54.5

-0

1.9

68.2

39.1

Associated Gene:

Gene:

EPHA5

Ensembl Gene ID:

ENSAPLG00000007060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007467

16902988 - 17091277

188290

ENSAPLT00000038272

16917263 - 17092218

174956

ENSAPLT00000030642

16917263 - 17092218

174956

ENSAPLT00000024442

16917263 - 17092218

174956

ENSAPLT00000019989

16917263 - 17091277

174015

ENSAPLT00000042216

16902988 - 17092218

189231