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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17074013_17078796_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17074013 - 17078796

Intron Length:

4784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGCACG

5'SS Class:

major

3'SS Sequence:

TTGTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATGCAA

U12 Branch Point Sequence:

TGCAACCTATCA

Flanking Amino Acid:

RPYWEMTNQDVIKAVEEGYR

Intron Amino Acid Position:

798

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

68.3

42.6

Major BPS

49.7

-0

1.3

61.4

36.2

Major PPT

83.1

0.75

0.8

77.8

Minor 5ss

42.1

-0.9

2.8

54.9

42.2

Minor BPS

43.4

-0.5

54.93

43.1

Associated Gene:

Gene:

EPHA5

Ensembl Gene ID:

ENSAPLG00000007060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019989

16917263 - 17091277

174015

ENSAPLT00000042216

16902988 - 17092218

189231

ENSAPLT00000007467

16902988 - 17091277

188290

ENSAPLT00000038272

16917263 - 17092218

174956

ENSAPLT00000030642

16917263 - 17092218

174956

ENSAPLT00000024442

16917263 - 17092218

174956