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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17176599_17179887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17176599 - 17179887

Intron Length:

3289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATCTCTTCGACT

Flanking Amino Acid:

PLPSLHEGSSGVDLPRRAAG

Intron Amino Acid Position:

634

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

85.1

25.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

87.8

0.85

0.6

88.4

21.1

Minor 5ss

35.1

-1.7

2.7

42.4

44.3

Minor BPS

62.7

0.48

1.6

77.43

39.3

Associated Gene:

Gene:

WWC2

Ensembl Gene ID:

ENSAPLG00000002645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048201

17136933 - 17201367

64435

ENSAPLT00000002721

17105354 - 17201367

96014