Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_17187582_17188349_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17187582 - 17188349

Intron Length:

768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAGCCA

5'SS Class:

major

3'SS Sequence:

TTTGTTTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAG

U12 Branch Point Sequence:

AGTTCAAGAATA

Flanking Amino Acid:

EQEQRGSEEDWLEMLVEASD

Intron Amino Acid Position:

890

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

58.3

40.4

Major BPS

64.3

0.36

1.6

41.2

Major PPT

84.1

0.77

0.9

79.9

37.7

Minor 5ss

30.5

-2.2

3.3

36.4

42.6

Minor BPS

47.1

-0.2

1.9

62.36

36.9

Associated Gene:

Gene:

WWC2

Ensembl Gene ID:

ENSAPLG00000002645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048201

17136933 - 17201367

64435

ENSAPLT00000002721

17105354 - 17201367

96014