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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17200023_17201300_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17200023 - 17201300

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGTTTCTAATT

Flanking Amino Acid:

QKVPLQVQSFREKIAYFTRA

Intron Amino Acid Position:

1164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.7

41.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

85.1

0.79

0.8

82.5

32.7

Minor 5ss

39.5

-1.2

3.3

47.3

Minor BPS

62.5

0.47

1.6

79.6

37.1

Associated Gene:

Gene:

WWC2

Ensembl Gene ID:

ENSAPLG00000002645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002721

17105354 - 17201367

96014

ENSAPLT00000048201

17136933 - 17201367

64435