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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17273887_17276545_R

Intron Information:

Intron Rank:

136985

Intron Class:

major

Intron Phase:

Intron Coordinates:

17273887 - 17276545

Intron Length:

2659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATCAA

U12 Branch Point Sequence:

TATCAAGTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

61.3

0.28

1.3

40.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

42.7

-0.5

2.3

59.41

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017961

17272871 - 17276576

3706