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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17306308_17306675_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17306308 - 17306675

Intron Length:

368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCCGTG

5'SS Class:

major

3'SS Sequence:

ATTTTTATTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATTC

Flanking Amino Acid:

SECATRVEIVRQSLQGRNTK

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.7

0.37

1.3

47.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.3

0.73

0.8

75.2

Minor 5ss

44.1

-0.6

3.6

63.6

48.1

Minor BPS

61.5

0.34

1.5

70.16

35.8

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016682

17305795 - 17328102

22308

ENSAPLT00000032367

17305795 - 17329912

24118