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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17308105_17310137_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17308105 - 17310137

Intron Length:

2033

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

AACTTTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

CTTGGTTAAACT

Flanking Amino Acid:

HTDHLVGYIIRLENAFYEHA

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

84.9

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

75.7

0.58

69.3

40.8

Minor 5ss

-1.9

3.2

42.9

44.7

Minor BPS

48.3

-0

2.2

70.57

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032367

17305795 - 17329912

24118

ENSAPLT00000016682

17305795 - 17328102

22308