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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17310238_17310576_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17310238 - 17310576

Intron Length:

339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGTTG

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TGTTTGTGAATG

Flanking Amino Acid:

KEFLNKTTHQLLFVRHQFKI

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.3

61.3

45.8

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

91.8

0.94

0.7

84.6

Minor 5ss

44.5

-0.6

3.5

63.6

48.1

Minor BPS

48.5

-0.2

2.2

60.39

41.9

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032367

17305795 - 17329912

24118

ENSAPLT00000016682

17305795 - 17328102

22308