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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17310957_17311739_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17310957 - 17311739

Intron Length:

783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAAGC

5'SS Class:

major

3'SS Sequence:

TGATTAATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGATTAATT

Flanking Amino Acid:

KTMAGFINYKICRLCFQHNT

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

69.9

41.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

69.3

0.43

60.3

44.8

Minor 5ss

39.4

-1.2

2.9

52.8

43.9

Minor BPS

66.8

0.61

89.07

35.8

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032367

17305795 - 17329912

24118

ENSAPLT00000016682

17305795 - 17328102

22308