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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17312359_17312920_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17312359 - 17312920

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

GCTGAATTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTGCTGAATT

Flanking Amino Acid:

QLASMLCNHDSSVVYPNPDP

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

71.7

40.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.3

0.46

61.3

43.5

Minor 5ss

-0.9

2.8

53.9

43.5

Minor BPS

63.8

0.51

1.9

83.33

37.8

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032367

17305795 - 17329912

24118

ENSAPLT00000016682

17305795 - 17328102

22308