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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17314453_17314538_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17314453 - 17314538

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATCTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTGTTTTTATCT

Flanking Amino Acid:

QLKEKNVLHSELIITLLSNA

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.2

0.61

0.9

78.1

36.1

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

60.8

0.42

1.6

74.5

43.2

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032367

17305795 - 17329912

24118

ENSAPLT00000016682

17305795 - 17328102

22308