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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17314773_17316652_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17314773 - 17316652

Intron Length:

1880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCATACTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCCTCTCAATT

Flanking Amino Acid:

YFAKDYAKALKLLDYVMCEY

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

100

1.24

0.5

100

Major PPT

74.8

0.56

0.9

68.4

36.9

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

62.3

0.46

1.5

77.15

39.7

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032367

17305795 - 17329912

24118

ENSAPLT00000016682

17305795 - 17328102

22308