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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17317990_17318094_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17317990 - 17318094

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TATCTGGATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATTTCTTATTT

Flanking Amino Acid:

IEKNLIKVLMNESPDPEPDC

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.1

36.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

68.5

0.42

1.1

61.5

43.5

Minor 5ss

32.2

-2

3.1

41.8

Minor BPS

70.7

0.73

1.5

84.59

36.2

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032367

17305795 - 17329912

24118

ENSAPLT00000016682

17305795 - 17328102

22308