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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17319710_17320202_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17319710 - 17320202

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTCAG

5'SS Class:

major

3'SS Sequence:

TTTTTTTCGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

ATGTGTTTAAAT

Flanking Amino Acid:

KTEDVGKKIEITSVDLVLGS

Intron Amino Acid Position:

684

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

62.7

43.2

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

87.2

0.84

0.8

28.1

Minor 5ss

-1.6

2.6

41.2

45.2

Minor BPS

58.2

0.34

1.9

75.25

41.7

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016682

17305795 - 17328102

22308

ENSAPLT00000032367

17305795 - 17329912

24118