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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17320391_17320970_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17320391 - 17320970

Intron Length:

580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTTTTCTTAAAG

Flanking Amino Acid:

WDSLAIQASTMIISRVPNIS

Intron Amino Acid Position:

746

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

84.7

0.78

0.9

86.6

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

77.9

0.74

1.4

80.39

35.1

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016682

17305795 - 17328102

22308

ENSAPLT00000032367

17305795 - 17329912

24118