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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17321120_17322685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17321120 - 17322685

Intron Length:

1566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTGGG

5'SS Class:

major

3'SS Sequence:

TCTTTAATCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTGTCTTTAATC

Flanking Amino Acid:

DVKLTAGLKPGQDANLTQKT

Intron Amino Acid Position:

796

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

61.6

43.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

78.6

0.64

0.9

70.5

38.9

Minor 5ss

38.2

-1.3

3.1

49.7

46.5

Minor BPS

73.7

0.72

1.2

73.46

38.5

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032367

17305795 - 17329912

24118

ENSAPLT00000016682

17305795 - 17328102

22308