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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17325712_17326394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17325712 - 17326394

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCAGC

5'SS Class:

major

3'SS Sequence:

TATTTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGTTTGTGATAT

Flanking Amino Acid:

ATGCYVISWKRSSPVESVPV

Intron Amino Acid Position:

965

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.1

67.1

44.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

89.6

0.89

0.7

85.3

29.1

Minor 5ss

38.3

-1.3

3.1

51.6

45.2

Minor BPS

43.2

-0.4

2.3

66.53

43.8

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032367

17305795 - 17329912

24118

ENSAPLT00000016682

17305795 - 17328102

22308