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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17326487_17327375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17326487 - 17327375

Intron Length:

889

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ATTTATTTGAGG

Flanking Amino Acid:

VETIPLHVNTDLPSFGRVRE

Intron Amino Acid Position:

996

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

77.6

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

73.3

0.52

74.8

33.9

Minor 5ss

40.4

-1.1

3.3

55.8

48.3

Minor BPS

50.2

-0.1

1.9

61.4

40.8

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032367

17305795 - 17329912

24118

ENSAPLT00000016682

17305795 - 17328102

22308