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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17328049_17329102_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17328049 - 17329102

Intron Length:

1054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTCTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ATTTTCTTAAAG

Flanking Amino Acid:

RFIPTHIFVKPQGRQADDNS

Intron Amino Acid Position:

1119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.5

40.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

78.3

0.64

79.1

32.9

Minor 5ss

35.6

-1.6

3.2

47.4

Minor BPS

73.4

0.6

1.4

74.89

36.7

Associated Gene:

Gene:

TRAPPC11

Ensembl Gene ID:

ENSAPLG00000015916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032367

17305795 - 17329912

24118