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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17459802_17467154_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17459802 - 17467154

Intron Length:

7353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

CACTCCCTGATT

Flanking Amino Acid:

LMEHLTTCFPGVPTPSPEIL

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

1.1

81.5

32.7

Major BPS

72.5

0.56

1.2

39.9

Major PPT

74.5

0.55

0.9

66.2

39.8

Minor 5ss

41.8

-0.9

3.2

58.1

46.5

Minor BPS

54.8

0.23

1.7

68.43

42.8

Associated Gene:

Gene:

STOX2

Ensembl Gene ID:

ENSAPLG00000015912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040669

17343639 - 17474030

130392

ENSAPLT00000021020

17453298 - 17474030

20733

ENSAPLT00000016589

17409689 - 17474030

64342