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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17498977_17501300_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
17498977 - 17501300

Intron Length:
2324

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGTACA

5'SS Class:
strong_major

3'SS Sequence:
GTTTTCTTTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCTTTAT

U12 Branch Point Sequence:
GTGTCCTAACAT

Flanking Amino Acid:
LWPVPEKHTEIYQKLKVVEH

Intron Amino Acid Position:
286

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97.1
1.11
0.7
89.8
22.5

Major BPS
83.9
0.84
1
73.9
41.3

Major PPT
89.8
0.89
0.7
84.7
30.1

Minor 5ss
36
-1.6
2.6
43.5
43.6

Minor BPS
49.1
0.01
2.1
69.75
46.7

Associated Gene:

Gene:
ENPP6

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

17495016 - 17532584
37569

17495016 - 17523023
28008