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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17501481_17502747_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
17501481 - 17502747

Intron Length:
1267

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCAGTGAT

5'SS Class:
strong_major

3'SS Sequence:
ACTCACTCCACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTAAAAT

U12 Branch Point Sequence:
TAGGGCTTAAAA

Flanking Amino Acid:
ALSNMITQIKSKGLQNDVNV

Intron Amino Acid Position:
226

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.3
0.76
1.2
81.4
32.7

Major BPS
70.6
0.51
1.1
75.9
34.4

Major PPT
69
0.43
0.9
61.3
34.1

Minor 5ss
29.8
-2.3
3.1
40.6
45.6

Minor BPS
49.9
-0
2
61.57
44.3

Associated Gene:

Gene:
ENPP6

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

17495016 - 17532584
37569

17495016 - 17523023
28008