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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17502890_17505910_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
17502890 - 17505910

Intron Length:
3021

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTACGTCAT

5'SS Class:
major

3'SS Sequence:
CTCCAACCTCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACCTCAG

U12 Branch Point Sequence:
TTCCCTCCAACC

Flanking Amino Acid:
DAISDALESFRNGSAEMAAV

Intron Amino Acid Position:
178

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.1
0.64
1.1
69.4
42.9

Major BPS
49.8
-0
1.5
59.3
39.1

Major PPT
69.4
0.44
0.9
58.6
37

Minor 5ss
35.3
-1.7
3.2
50.3
46

Minor BPS
49.2
-0
1.9
64.96
40.6

Associated Gene:

Gene:
ENPP6

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

17495016 - 17532584
37569

17495016 - 17523023
28008