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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17560334_17564192_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17560334 - 17564192

Intron Length:

3859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGACTCCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAA

U12 Branch Point Sequence:

TTTCTTCTGACT

Flanking Amino Acid:

NEVDSTVNIVVVGQPHLDGS

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

71.2

0.53

72.3

32.8

Major PPT

63.5

0.3

1.1

60.6

39.7

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

58.6

0.35

1.6

80.89

34.4

Associated Gene:

Gene:

IRF2

Ensembl Gene ID:

ENSAPLG00000015442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040296

17553519 - 17591561

38043

ENSAPLT00000023144

17553903 - 17579578

25676

ENSAPLT00000016098

17553941 - 17577940

24000