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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17564305_17567915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17564305 - 17567915

Intron Length:

3611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCATTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ACTGTTTTCATT

Flanking Amino Acid:

EKDDKFKQIKQEPVESSFGI

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

100

1.24

0.5

100

Major PPT

79.1

0.65

0.8

71.1

39.6

Minor 5ss

35.2

-1.7

49.5

46.3

Minor BPS

48.3

-0

1.8

64.47

41.5

Associated Gene:

Gene:

IRF2

Ensembl Gene ID:

ENSAPLG00000015442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016098

17553941 - 17577940

24000

ENSAPLT00000040296

17553519 - 17591561

38043

ENSAPLT00000023144

17553903 - 17579578

25676