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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17570614_17571235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17570614 - 17571235

Intron Length:

622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGGGA

5'SS Class:

major

3'SS Sequence:

TTTTCTTGCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

GTGTGCCTAACT

Flanking Amino Acid:

PLFRNWAIHTGKYQSGVDKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

58.6

40.4

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

0.68

0.8

Minor 5ss

34.7

-1.7

3.5

47.2

48.2

Minor BPS

55.9

0.26

2.1

77.54

44.5

Associated Gene:

Gene:

IRF2

Ensembl Gene ID:

ENSAPLG00000015442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040296

17553519 - 17591561

38043

ENSAPLT00000023144

17553903 - 17579578

25676

ENSAPLT00000016098

17553941 - 17577940

24000