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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17576868_17577813_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17576868 - 17577813

Intron Length:

946

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

AAACAAGTAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

1.2

89.3

23.5

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

84.5

0.78

0.8

82.1

29.9

Minor 5ss

30.5

-2.2

3.9

48.5

40.3

Minor BPS

39.7

-0.9

2.2

44.29

40.3

Associated Gene:

Gene:

IRF2

Ensembl Gene ID:

ENSAPLG00000015442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016098

17553941 - 17577940

24000