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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17576868_17579344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17576868 - 17579344

Intron Length:

2477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTATTTT

5'SS Class:

major

3'SS Sequence:

TTGTTCCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

AAACAAGTAACG

Flanking Amino Acid:

TLPSSWTSRQLLAVQVTMPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.2

35.3

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

84.5

0.78

0.8

82.1

29.9

Minor 5ss

47.9

-0.2

2.6

67.6

43.4

Minor BPS

39.7

-0.9

2.2

44.29

40.3

Associated Gene:

Gene:

IRF2

Ensembl Gene ID:

ENSAPLG00000015442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023144

17553903 - 17579578

25676