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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17576868_17591346_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17576868 - 17591346

Intron Length:

14479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACACA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

AAACAAGTAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

36.5

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

84.5

0.78

0.8

82.1

29.9

Minor 5ss

-1.2

2.9

49.8

46.2

Minor BPS

39.7

-0.9

2.2

44.29

40.3

Associated Gene:

Gene:

IRF2

Ensembl Gene ID:

ENSAPLG00000015442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040296

17553519 - 17591561

38043