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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17634832_17637223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17634832 - 17637223

Intron Length:

2392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTCAT

U12 Branch Point Sequence:

TTTGTTTTTAAG

Flanking Amino Acid:

KTVFKDNIHVGNFVRTILQP

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

69.4

0.48

1.2

71.6

36.4

Major PPT

82.1

0.72

86.9

31.1

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

48.1

-0.2

1.9

59.36

42.7

Associated Gene:

Gene:

PRIMPOL

Ensembl Gene ID:

ENSAPLG00000015061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046298

17630965 - 17640847

9883

ENSAPLT00000037978

17631655 - 17642948

11294

ENSAPLT00000015714

17630960 - 17642948

11989