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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17637515_17639166_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17637515 - 17639166

Intron Length:

1652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

ATGTTGTGAAAT

Flanking Amino Acid:

EGDKQLFVDLGVYTKNRNLR

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

89.5

23.2

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

81.8

0.72

0.8

74.6

36.4

Minor 5ss

38.7

-1.3

2.9

50.9

45.5

Minor BPS

46.9

-0.1

2.2

68.09

42.6

Associated Gene:

Gene:

PRIMPOL

Ensembl Gene ID:

ENSAPLG00000015061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037978

17631655 - 17642948

11294

ENSAPLT00000015714

17630960 - 17642948

11989

ENSAPLT00000046298

17630965 - 17640847

9883