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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17640501_17640782_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17640501 - 17640782

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCTGGGGGA

5'SS Class:

major

3'SS Sequence:

TGTTTTAACAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTGTTTTAACA

Flanking Amino Acid:

RGTTSLFCWMVHGRLSGFTI

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.4

0.25

1.4

53.9

40.4

Major BPS

89.7

0.98

0.7

89.9

Major PPT

52.8

0.06

1.7

62.4

42.4

Minor 5ss

12.8

-4.3

3.6

11.8

28.6

Minor BPS

75.7

0.8

1.2

82.25

33.1

Associated Gene:

Gene:

PRIMPOL

Ensembl Gene ID:

ENSAPLG00000015061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046298

17630965 - 17640847

9883