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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17640868_17640951_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17640868 - 17640951

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

AGTTTATAACCT

Flanking Amino Acid:

SLVNKDGVQGGIRQWSYFSL

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.9

33.2

Major BPS

77.9

0.69

78.3

31.3

Major PPT

0.61

0.9

69.8

36.6

Minor 5ss

34.1

-1.8

44.4

43.1

Minor BPS

46.1

-0.2

2.1

67.72

Associated Gene:

Gene:

PRIMPOL

Ensembl Gene ID:

ENSAPLG00000015061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037978

17631655 - 17642948

11294

ENSAPLT00000015714

17630960 - 17642948

11989