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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17641517_17641598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17641517 - 17641598

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTAACTTTAATT

Flanking Amino Acid:

VCREKNFRSQSFPLPPGICL

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

0.9

80.7

31.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.54

0.9

73.3

36.3

Minor 5ss

48.1

-0.2

2.4

63.2

35.1

Minor BPS

76.1

0.9

1.1

85.55

34.5

Associated Gene:

Gene:

PRIMPOL

Ensembl Gene ID:

ENSAPLG00000015061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015714

17630960 - 17642948

11989

ENSAPLT00000037978

17631655 - 17642948

11294