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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17641646_17642642_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17641646 - 17642642

Intron Length:

997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTCTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TGTTTCTAAAAG

Flanking Amino Acid:

GICLPSLFKEEEDYMVMDGC

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

70.8

0.52

70.6

31.6

Major PPT

63.5

0.3

1.1

65.1

39.8

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

56.7

0.07

1.9

64.96

42.7

Associated Gene:

Gene:

PRIMPOL

Ensembl Gene ID:

ENSAPLG00000015061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037978

17631655 - 17642948

11294

ENSAPLT00000015714

17630960 - 17642948

11989