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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17657380_17658481_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17657380 - 17658481

Intron Length:

1102

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCCGGGCTG

5'SS Class:

major

3'SS Sequence:

CCATGCATCTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAAAAAT

U12 Branch Point Sequence:

CCACCCAAAAAT

Flanking Amino Acid:

LPPLGPTNTPKHCPTCPSA*

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.2

57.5

39.9

Major BPS

50.5

0.01

1.1

57.3

34.4

Major PPT

47.7

-0.1

1.7

54.3

Minor 5ss

19.8

-3.5

4.1

29.6

37.1

Minor BPS

43.3

-0.4

56.5

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025522

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030277

17656545 - 17658561

2017