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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17661900_17662090_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
17661900 - 17662090

Intron Length:
191

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGATAC

5'SS Class:
strong_major

3'SS Sequence:
GTTTCTCTTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTATTAT

U12 Branch Point Sequence:
TGTAGCTTAGCT

Flanking Amino Acid:
KESGLKSFEQVKDIIMHTEM

Intron Amino Acid Position:
653

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.7
0.98
0.8
81.2
26.3

Major BPS
72.4
0.56
1.1
63.7
42.3

Major PPT
85.9
0.81
0.8
77.4
36.9

Minor 5ss
38.2
-1.3
3.1
49.9
46.6

Minor BPS
55.6
0.25
2.1
77.8
44.1

Associated Gene:

Gene:
ACSL1

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

17661759 - 17689179
27421