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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17662163_17662237_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
17662163 - 17662237

Intron Length:
75

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGTGAT

5'SS Class:
strong_major

3'SS Sequence:
CTTGTATCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAA

U12 Branch Point Sequence:
TGTTCTTGTATC

Flanking Amino Acid:
GSYEELCKNKDVKKHILEDM

Intron Amino Acid Position:
629

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93
1.01
0.7
86.6
22.3

Major BPS
78.4
0.71
0.9
81.3
29.8

Major PPT
75.5
0.57
0.9
69.1
36.1

Minor 5ss
28.9
-2.4
3.2
39.6
46.4

Minor BPS
53.7
0.1
1.8
67.83
37.8

Associated Gene:

Gene:
ACSL1

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

17661759 - 17689179
27421