Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_17665878_17666536_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17665878 - 17666536

Intron Length:

659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAATGT

5'SS Class:

major

3'SS Sequence:

TTCTGTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

TTCTGTTTAACA

Flanking Amino Acid:

SLSMPGDWTAGHVGAPMSCN

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

40.6

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

80.3

0.68

0.9

76.6

36.3

Minor 5ss

37.9

-1.4

3.4

56.7

47.4

Minor BPS

69.4

0.6

1.7

78.6

38.6

Associated Gene:

Gene:

ACSL1

Ensembl Gene ID:

ENSAPLG00000010847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011470

17661759 - 17689179

27421