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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17813382_17823266_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17813382 - 17823266

Intron Length:

9885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TGCCATTTTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TGTTTCTTAAGT

Flanking Amino Acid:

HRSKMYSEFPAFLQLEKKEQ

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

82.2

0.8

71.9

35.8

Major PPT

67.1

0.39

1.1

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

0.86

1.6

88.23

36.9

Associated Gene:

Gene:

CFAP97

Ensembl Gene ID:

ENSAPLG00000011187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029190

17805251 - 17824581

19331

ENSAPLT00000011645

17803613 - 17824581

20969