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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17852055_17866640_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17852055 - 17866640

Intron Length:

14586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACCA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

HFRDLKGANARQEDPPRPFL

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

67.7

37.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.7

0.76

0.6

Minor 5ss

31.6

-2.1

3.1

40.3

45.3

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

SNX25

Ensembl Gene ID:

ENSAPLG00000010977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011461

17838589 - 17916373

77785

ENSAPLT00000047301

17841184 - 17916373

75190