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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17872541_17882942_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17872541 - 17882942

Intron Length:

10402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTATTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAA

U12 Branch Point Sequence:

TTTGCTGTATTC

Flanking Amino Acid:

SNFPQVKKQKDSKGKETAAM

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

25.3

Major BPS

60.3

0.26

65.5

Major PPT

73.1

0.52

0.9

69.3

40.8

Minor 5ss

-1.3

3.1

51.9

44.9

Minor BPS

-0.2

2.2

65.17

41.7

Associated Gene:

Gene:

SNX25

Ensembl Gene ID:

ENSAPLG00000010977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011461

17838589 - 17916373

77785

ENSAPLT00000047301

17841184 - 17916373

75190