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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17896270_17899667_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17896270 - 17899667

Intron Length:

3398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TTTTTCTTACCA

Flanking Amino Acid:

ICNSPKPDKKIVSKLKDEIT

Intron Amino Acid Position:

511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

0.9

0.6

85.3

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

76.8

0.84

1.5

86.69

32.1

Associated Gene:

Gene:

SNX25

Ensembl Gene ID:

ENSAPLG00000010977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047301

17841184 - 17916373

75190

ENSAPLT00000011461

17838589 - 17916373

77785